OHDSI - CDM标准医疗临床 - 科研数据模型

VISIT_DETAIL表

2019-08-21  本文已影响0人  skysunky

VISIT_DETAIL表是一个可选表,用于表示父visit_occurrence表中每条记录的详细信息。对于visit_occurrence表中的每个记录,visit_detail表中可能有0个或更多记录,呈1:n比例,其中n可能为0. visit_detail。表在结构上与visit_occurrence表非常相似,属于与访问类似的域。

The VISIT_DETAIL table is an optional table used to represents details of each record in the parent visit_occurrence table. For every record in visit_occurrence table there may be 0 or more records in the visit_detail table with a 1:n relationship where n may be 0. The visit_detail table is structurally very similar to visit_occurrence table and belongs to the similar domain as the visit.

Field Required Type Description
visit_detail_id Yes integer A unique identifier for each Person's visit or encounter at a healthcare provider.
就诊-详情-id -- -- 居民在任何医疗机构就诊行为的唯一标识符。
person_id Yes integer A foreign key identifier to the Person for whom the visit is recorded. The demographic details of that Person are stored in the PERSON table.
居民-id -- -- 外键,指向该表所记录的就诊居民的标识符。该人员的人口统计详细信息存储在PERSON表中。
visit_detail_concept_id Yes integer A foreign key that refers to a visit Concept identifier in the Standardized Vocabularies belonging to the 'Visit' Vocabulary.
就诊-详情-概念-id -- -- 外键,指向标准词汇表中“就诊”词汇表的就诊概念的标识符。
visit_detail_start_date No date The start date of the visit.
就诊-详情-起始-日期 -- -- 就诊的起始时间
visit_detail_start_datetime Yes datetime The date and time of the visit started.
就诊-详情-起始-日期时间 -- -- 就诊的起始日期+时间
visit_detail_end_date No date The end date of the visit. If this is a one-day visit the end date should match the start date.
就诊-详情-截止-日期 -- -- 就诊的结束日期。如果这是一天就诊,则结束日期应与开始日期匹配。
visit_detail_end_datetime Yes datetime The date and time of the visit end.
就诊-详情-截止-日期时间 -- -- 就诊的详细截止日期和时间
visit_detail_type_concept_id Yes Integer A foreign key to the predefined Concept identifier in the Standardized Vocabularies reflecting the type of source data from which the visit record is derived belonging to the 'Visit Type' vocabulary.
就诊-详情-类型-概念-id -- -- 外键,标准词汇表中预定义的概念标识符,反映从中导出访问记录的源数据类型,属于“访问类型”词汇表。
provider_id No integer A foreign key to the provider in the provider table who was associated with the visit.
共享者-id -- -- 外键,指向与就诊关联的贡献者表中的贡献者们。
care_site_id No integer A foreign key to the care site in the care site table that was visited.
医疗机构 -- -- 外键,访问的护理站点表中护理站点。
visit_detail_source_value No string(50) The source code for the visit as it appears in the source data.
就诊-详情-源-值 -- -- 访问源代码在源数据中存储。
visit_detail_source_concept_id Yes Integer A foreign key to a Concept that refers to the code used in the source.
就诊-详情-源-概念-id -- -- 外键,指向源数据使用的编码、代码
admitted_from_source_value No Varchar(50) The source code for the admitting source as it appears in the source data.
允许-从-源-值 --- -- 源数据中允许的、显示的源代码。
admitted_from_concept_id Yes Integer A foreign key to the predefined concept in the 'Place of Service' Vocabulary reflecting the admitting source for a visit.
允许-来自-概念-id -- -- 外键,指向“医疗机构地点”词汇表中预设的概念,反映了就诊的准入来源
discharge_to_source_value No Varchar(50) The source code for the discharge disposition as it appears in the source data.
出院-到-源-值 -- -- 源数据里存储的出院后目的地的源码
discharge_to_concept_id Yes Integer A foreign key to the predefined concept in the 'Place of Service' Vocabulary reflecting the discharge disposition for a visit.
出院-到-概念-值 -- -- 外键,指向“医疗机构地点”词汇表中预置的概念,反映一次就诊后,出院的目的地
preceding_visit_detail_id No Integer A foreign key to the VISIT_DETAIL table of the visit immediately preceding this visit
先前-就诊-详情-id -- -- 外键,指向该次就诊的前1次就诊所对应的VISIT_DETAIL表
visit_detail_parent_id No Integer A foreign key to the VISIT_DETAIL table record to represent the immediate parent visit-detail record.
就诊-详情-父代-id -- -- 外键,VISIT_DETAIL表所记录的,指向上一级父代 visit-detail 记录
visit_occurrence_id Yes Integer A foreign key that refers to the record in the VISIT_OCCURRENCE table. This is a required field, because for every visit_detail is a child of visit_occurrence and cannot exist without a corresponding parent record in visit_occurrence.
就诊-发生-id -- -- 外键,指向VISIT_OCCURRENCE表中的记录。这是一个必填字段,因为每个visit_detail都是visit_occurrence的子代文件,且若在visit_occurrence中没有相应的父记录时则不能存在。

共识

所有VISIT_OCCURRENCE表的共识都适用于VISIT_DETAIL表,另外还需注意的请见以下详情:

All conventions used in VISIT_OCCURRENCE apply to VISIT_DETAIL, with some notable exceptions as detailed below

No. Convention Description 共识
1 A Visit Detail is an optional detail record for each Visit Occurrence to a healthcare facility. For every record in VISIT_DETAIL there has to be a parent VISIT_OCCURRENCE record. 就诊详情是选填信息,记录每次到医疗机构的就诊详情。对于VISIT_DETAIL中的每条记录,必须有父VISIT_OCCURRENCE记录。
2 One record in VISIT_DETAIL can only have one VISIT_OCCURRENCE parent. VISIT_DETAIL中的一条记录只能有一个父代VISIT_OCCURRENCE。
3 A single VISIT_OCCURRENCE record may have many child VISIT_DETAIL records. 一个VISIT_OCCURRENCE记录可能有许多子VISIT_DETAIL记录。
4 Valid Visit Concepts belong to the 'Visit' domain. Standard Visit Concepts are yet to be defined, but will represent a detail of the Standard Visit Concept in VISIT_OCCURRENCE. 有效的访问概念属于“访问”域。标准访问概念尚未定义,但将代表VISIT_OCCURRENCE中标准访问概念的详细信息。
5 Handling of death: In the case when a patient died during admission (VISIT_DETAIL.DISCHARGE_TO_CONCEPT_ID = 4216643 'Patient died'), a record in the Observation table should be created with OBSERVATION_TYPE_CONCEPT_ID = 44818516 (EHR discharge status 'Expired'). 死亡处理:如果患者在住院时死亡(VISIT_DETAIL.DISCHARGE_TO_CONCEPT_ID = 4216643'患者死亡'),应创建观察表中的OBSERVATION_TYPE_CONCEPT_ID = 44818516(EHR出院状态'过期')记录。
6 Source Concepts from place of service vocabularies are mapped into these Standard Visit Concepts in the Standardized Vocabularies. 来自机构地点词汇表的源概念被映射到标准化词汇表中的“标准就诊概念”。
7 On any one day, there could be more than one visit. VISIT_OCCURRENCE allows for more than one visit within a single day. VISIT_DETAIL is to be used to only capture details within the visit. 在任何一天,可能会有不止一次就诊。VISIT_OCCURRENCE允许记录一天内进行的多次就诊。VISIT_DETAIL用于仅捕获就诊中的详细信息。
8 One visit may involve multiple Providers, in which case, in VISIT_OCCURRENCE, the ETL must specify how a single PROVIDER_ID is selected or leave the PROVIDER_ID field null. VISIT_DETAIL allows for the ETL to specify multiple child records per VISIT_OCCURRENCE - and each of these child records may represent different PROVIDER_IDs. 一次就诊可能涉及多个贡献者,在这种情况下,在VISIT_OCCURRENCE中,ETL必须指定如何选择单个PROVIDER_ID或将PROVIDER_ID字段保留为空。VISIT_DETAIL允许ETL为每个VISIT_OCCURRENCE指定多个子记录 - 并且每个子记录可以表示不同的PROVIDER_ID。
9 One visit may involve multiple Care Sites, in which case, in VISIT_OCCURRENCE, the ETL must specify how a single CARE_SITE_ID is selected or leave the CARE_SITE_ID field null. VISIT_DETAIL allows for the ETL to specify multiple child records per visit occurrence - and each of these child records may represent different CARE_SITEs. 一次就诊可能涉及多个医疗机构,这种情况下,在VISIT_OCCURRENCE中,ETL必须指定如何选择单个CARE_SITE_ID或将CARE_SITE_ID字段保留为null。VISIT_DETAIL允许ETL为每次就诊发生表指定多个子记录 - 并且这些子记录中的每一个可以表示不同的CARE_SITE。
10 Just like in VISIT_OCCURRENCE, records in VISIT_DETAIL may be sequentially related to each. These sequential relations are represented using PRECEDING_VISIT_DETAIL_ID. 就像在VISIT_OCCURRENCE中一样,VISIT_DETAIL中的记录可能根据每个记录的顺序相关联。使用PRECEDING_VISIT_DETAIL_ID表示这些顺序关系。
11 Unlike VISIT_OCCURRENCE, VISIT_DETAIL may have nested visits with hierarchical relationships to each other. These relationships are represented using VISIT_DETAIL_PARENT_ID. 与VISIT_OCCURRENCE不同,VISIT_DETAIL可能存在彼此具有层级嵌套关系的就诊关系。这些关系使用VISIT_DETAIL_PARENT_ID表示。
12 In US claims data Header/summary data that summarizes the entire claim and Line/detail that details a claim, detail is thus a child of the summary, and for every record in summary there is one or more records in detail. i.e. there will be at least one foreign key link from VISIT_DETAIL to VISIT_OCCURRENCE. 在“美国索赔数据”中,标题/摘要数据总结了详细说明索赔的整个索赔和行/详细信息,因此详细信息是摘要的子项,对于摘要中的每个记录,都有一个或多个详细记录。即从VISIT_DETAIL到VISIT_OCCURRENCE将至少有一个外键链接。

例如:患者的整个住院期可能是VISIT_OCCURRENCE表中的一条记录。这可以有一个或多个详细记录,例如ER,ICU,医疗楼层,康复楼层等。这些就诊细节中的每一个可以具有不同的开始/结束日期 - 时间,不同的concept_id和fact_id。这些将成为VISIT_DETAIL中的独立记录,其中包含指向VISIT_OCCURRENCE的外键链接。

For example: an entire inpatient stay maybe one record in the VISIT_OCCURRENCE table. This may have one or more detail records such as ER, ICU, medical floor, rehabilitation floor etc. Each of these visit details may have different start/end date-times, different concept_ids and fact_ids. These would become separate records in VISIT_DETAIL with a FK link to VISIT_OCCURRENCE.

VISIT_DETAIL内的每条记录可以相互顺序性关联 - > ER到ICU再到住院病房,到康复科,或父子层级关联 - >在ICU住院期间去透析治疗室。

Each record within VISIT_DETAIL may be related to each other, sequentially –> ER leading to ICU leading to medical floor, leading to rehabilitation, or in hierarchical parent-child visit –> a visit for dialysis while in ICU.


请注意,域是“就诊”,它在OMOP CDM中的VISIT_OCCURRENCE和VISIT_DETAIL之间共享使用。VISIT_OCCURRENCE的关键区别是:

Note the domain is Visit, and it is shared between VISIT_OCCURRENCE and VISIT_DETAIL in OMOP CDM. The key deviation from VISIT_OCCURRENCE is


本系列在介绍目前世界上最适用于临床科研+卫生经济学的标准医疗大数据格式(未经严谨考证,但有相关研究发表在专业期刊上),俨然是真实世界研究方案里面最接进成熟的基础建设方案。感兴趣的介绍请移步B站观看视频。

OHDSI——观察性健康医疗数据科学与信息学,是一个世界性的公益型非盈利研究联盟,主要研究全方位医学大数据分析的开源解决方案,旨在通过大规模数据分析和挖掘来提升临床医学数据价值,实现跨学科、跨行业的多方合作。目前,目前,已有来自美国、加拿大、澳大利亚、英国等几十个国家地区的上百个组织机构,高校,医院和公司企业参与了OHDSI全球协作网络,如斯坦福、哈佛、杜克大学医学院,强生、诺华、甲骨文、IBM公司,拥有超过6亿人口的临床数据规模,累计协作研究发表了上百篇论文。

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