2019-07-05tabix

2019-07-05  本文已影响0人  YX_Andrew

tabix is the best tool to extract regions of interest from vcf files

bgzip my.vcf # tabix works on block compressed data only (output my.vcf.gz)
tabix -p vcf my.vcf.gz # index vcf file 
tabix my.vcf.gz chr1:1-1000000

See other options of tabix http://www.htslib.org/doc/tabix.html

上一篇 下一篇

猜你喜欢

热点阅读