Easyfig比较基因组结构图
2021-08-13 本文已影响0人
胡童远
官网:http://mjsull.github.io/Easyfig/
![](https://img.haomeiwen.com/i19404765/2ca9e5ab5f80e2c2.png)
下载:http://mjsull.github.io/Easyfig/files.html
![](https://img.haomeiwen.com/i19404765/c64b3b33a8edbbd3.png)
下载example1(基因组gbk和blast文件)
![](https://img.haomeiwen.com/i19404765/6b8015e8c686ce1c.png)
下载,安装easyfig_win
操作手册:https://github.com/mjsull/Easyfig/wiki/Tutorials
example1分析:https://github.com/mjsull/Easyfig/wiki/Example-1.-Simple-genome-region-comparison
1 比较两个基因组
![](https://img.haomeiwen.com/i19404765/e7dc919c301a4592.png)
![](https://img.haomeiwen.com/i19404765/1b55b908bbb08c22.png)
2 Invert基因组
![](https://img.haomeiwen.com/i19404765/45042fcef342a9cb.png)
![](https://img.haomeiwen.com/i19404765/ed0fdb130a59b8dc.png)
3 CDS区着色
![](https://img.haomeiwen.com/i19404765/39d41c9a99f4c8a5.png)
![](https://img.haomeiwen.com/i19404765/63eb51b22646ef60.png)
4 局部放大
![](https://img.haomeiwen.com/i19404765/c6ac23b351a0061f.png)
![](https://img.haomeiwen.com/i19404765/f2fdcb8e4a9b270b.png)
Invert sequence 2
![](https://img.haomeiwen.com/i19404765/59133a0e148a5902.png)
引用文献:
Anaerobic gut fungi are an untapped reservoir of natural products. PNAS. 2021
![](https://img.haomeiwen.com/i19404765/7fd17baf905c4687.png)