BiocManager::install("CATALYST")

R version 4.0.5 (2021-03-31) -- "Shake and Throw"
Copyright (C) 2021 The R Foundation for Statistical Computing
Platform: x86_64-w64-mingw32/x64 (64-bit)

R is free software and comes with ABSOLUTELY NO WARRANTY.
You are welcome to redistribute it under certain conditions.
Type 'license()' or 'licence()' for distribution details.

R is a collaborative project with many contributors.
Type 'contributors()' for more information and
'citation()' on how to cite R or R packages in publications.

Type 'demo()' for some demos, 'help()' for on-line help, or
'help.start()' for an HTML browser interface to help.
Type 'q()' to quit R.

> # construct SingleCellExperiment
> #BiocManager::install("CATALYST")
> library(CATALYST)
Error in library(CATALYST) : 不存在叫‘CATALYST’这个名字的程辑包
> BiocManager::install("CATALYST")
'getOption("repos")' replaces Bioconductor standard repositories, see '?repositories' for details

replacement repositories:
    CRAN: https://mirrors.tuna.tsinghua.edu.cn/CRAN/

Bioconductor version 3.12 (BiocManager 1.30.16), R 4.0.5 (2021-03-31)
Installing package(s) 'CATALYST'
trying URL 'https://bioconductor.org/packages/3.12/bioc/bin/windows/contrib/4.0/CATALYST_1.14.1.zip'
Content type 'application/zip' length 7717393 bytes (7.4 MB)
downloaded 7.4 MB

package ‘CATALYST’ successfully unpacked and MD5 sums checked

The downloaded binary packages are in
    C:\Users\Nano\AppData\Local\Temp\Rtmp42r4S7\downloaded_packages
Old packages: 'ade4', 'ape', 'argparse', 'arrow', 'backports', 'BayesFactor', 'bayestestR',
  'bbmle', 'BH', 'blob', 'blogdown', 'bookdown', 'brew', 'brio', 'Brobdingnag', 'broom', 'bslib',
  'cachem', 'Cairo', 'carData', 'caret', 'caTools', 'circlize', 'cli', 'clipr', 'clue',
  'clusterProfiler', 'clustree', 'cmprsk', 'coin', 'colorspace', 'colourpicker', 'commonmark',
  'conquer', 'correlation', 'corrplot', 'cpp11', 'crayon', 'credentials', 'crosstalk', 'crul',
  'curl', 'data.table', 'DBI', 'dbplyr', 'DelayedArray', 'deldir', 'dendextend', 'dendsort',
  'densityClust', 'DEoptimR', 'desc', 'DescTools', 'DESeq2', 'deSolve', 'devtools', 'diffobj',
  'digest', 'doParallel', 'doSNOW', 'dplyr', 'dqrng', 'DT', 'dtplyr', 'edgeR', 'effectsize',
  'ellipsis', 'EMT', 'enrichplot', 'ensembldb', 'evaluate', 'Exact', 'exactRankTests',
  'ExperimentHub', 'expm', 'fansi', 'farver', 'fastcluster', 'fastICA', 'fastmap', 'fastmatch',
  'findpython', 'fitdistrplus', 'flextable', 'fmsb', 'forcats', 'foreach', 'foreign', 'formatR',
  'fs', 'future', 'future.apply', 'gdtools', 'generics', 'GenomeInfoDb', 'GenomicFeatures',
  'gert', 'GGally', 'ggdendro', 'ggExtra', 'ggforce', 'ggnewscale', 'ggplotify', 'ggraph',
  'ggrastr', 'ggrepel', 'ggsignif', 'ggstatsplot', 'gh', 'gld', 'glmnet', 'glue', 'gmp',
  'goftest', 'googlesheets4', 'gower', 'graphlayouts', 'GSVA', 'gtools', 'haven', 'hdf5r',
  'HiddenMarkov', 'highr', 'Hmisc', 'hms', 'htmlTable', 'htmltools', 'htmlwidgets', 'httpuv',
  'igraph', 'inline', 'insight', 'ipred', 'irlba', 'isoband', 'iterators', 'job', 'jpeg',
  'jquerylib', 'jsonlite', 'KernSmooth', 'knitr', 'LaplacesDemon', 'later', 'lava', 'leiden',
  'libcoin', 'lifecycle', 'lme4', 'lmtest', 'loo', 'lubridate', 'maftools', 'magick', 'magrittr',
  'maps', 'maptools', 'MASS', 'mathjaxr', 'Matrix', 'MatrixGenerics', 'MatrixModels',
  'matrixStats', 'mc2d', 'MCMCpack', 'memoise', 'memuse', 'meta', 'metaBMA', 'metap', 'metaplus',
  'mets', 'mgcv', 'mime', 'multcomp', 'mvtnorm', 'network', 'nlme', 'nloptr', 'nycflights13',
  'officer', 'openssl', 'openxlsx', 'outliers', 'paletteer', 'parallelDist', 'parallelly',
  'parameters', 'pbapply', 'pbkrtest', 'pdftools', 'pec', 'performance', 'permute', 'pillar',
  'pixmap', 'pkgbuild', 'pkgload', 'plotly', 'plotrix', 'plyr', 'PMCMRplus', 'pracma',
  'prismatic', 'pROC', 'processx', 'proj4', 'promises', 'proxy', 'pryr', 'ps', 'psych',
  'quantreg', 'R.devices', 'R.utils', 'R6', 'ragg', 'ranger', 'rappdirs', 'rbibutils', 'rbokeh',
  'rcmdcheck', 'Rcpp', 'RcppAnnoy', 'RcppArmadillo', 'RcppGSL', 'RcppParallel', 'RCurl',
  'Rdpack', 'readr', 'readxl', 'recipes', 'remotes', 'reprex', 'reticulate', 'rex', 'Rfast',
  'rhdf5filters', 'ridge', 'rio', 'riskRegression', 'rjags', 'rJava', 'rjson', 'rlang', 'rlist',
  'rmarkdown', 'rmdformats', 'Rmpfr', 'Rmpi', 'rngtools', 'robustbase', 'rootSolve', 'roxygen2',
  'rrcov', 'RSQLite', 'rstan', 'rstatix', 'rsvd', 'rtracklayer', 'Rttf2pt1', 'rvcheck',
  'rversions', 'rvest', 'sandwich', 'sass', 'scattermore', 'scatterpie', 'scCATCH',
  'sctransform', 'segmented', 'seqinr', 'servr', 'sessioninfo', 'Seurat', 'SeuratObject',
  'shadowtext', 'shape', 'shiny', 'shinyjs', 'Signac', 'sitmo', 'slam', 'sn', 'snow', 'sp',
  'SparseM', 'spatstat', 'spatstat.core', 'spatstat.data', 'spatstat.geom', 'spatstat.linnet',
  'spatstat.sparse', 'spatstat.utils', 'statmod', 'statnet.common', 'statsExpressions',
  'stringi', 'SuppDists', 'survival', 'survminer', 'svglite', 'systemfonts', 'testthat',
  'textshaping', 'TH.data', 'tibble', 'tidyr', 'tidyselect', 'tidyverse', 'timereg', 'tinyarray',
  'tinytex', 'tweenr', 'tzdb', 'umap', 'usethis', 'utf8', 'uuid', 'uwot', 'V8', 'vcd', 'vctrs',
  'VennDiagram', 'VGAM', 'viridis', 'viridisLite', 'vroom', 'waldo', 'WGCNA', 'withr', 'WRS2',
  'xfun', 'XML', 'xml2', 'yaml', 'zip', 'boot', 'class', 'cluster', 'lattice', 'nnet', 'rpart',
  'spatial'
Update all/some/none? [a/s/n]: 
n