生信修炼数据-R语言-图表-决策-Linux-PythonCook R

R中的循环多图处理技巧

2018-12-14  本文已影响5人  LeoinUSA

1.制造一些图

制造一些图片,为后续的操作做准备

library(ggplot2)

# This example uses the ChickWeight dataset, which comes with ggplot2
# First plot
p1 <- ggplot(ChickWeight, aes(x=Time, y=weight, colour=Diet, group=Chick)) +
    geom_line() +
    ggtitle("Growth curve for individual chicks")

# Second plot
p2 <- ggplot(ChickWeight, aes(x=Time, y=weight, colour=Diet)) +
    geom_point(alpha=.3) +
    geom_smooth(alpha=.2, size=1) +
    ggtitle("Fitted growth curve per diet")

# Third plot
p3 <- ggplot(subset(ChickWeight, Time==21), aes(x=weight, colour=Diet)) +
    geom_density() +
    ggtitle("Final weight, by diet")

# Fourth plot
p4 <- ggplot(subset(ChickWeight, Time==21), aes(x=weight, fill=Diet)) +
    geom_histogram(colour="black", binwidth=50) +
    facet_grid(Diet ~ .) +
    ggtitle("Final weight, by diet") +
    theme(legend.position="none")        # No legend (redundant in this graph)    

图片列表

使用ggarrange函数进行合并,可指定列和行

library(ggpubr)
plist <- list(p1, p2, p3, p4)
do.call("ggarrange", c(plist, ncol=2, nrow=2))

使用一些其他的也可以例如cowplot的函数和grid.arrange函数,但是我更加喜欢ggarrange.

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