circos安装(2018-07-12)

2018-07-12  本文已影响0人  简单点lili

官网地址:
http://circos.ca/guide/
1下载

wget -c http://circos.ca/distribution/circos-0.69-6.tgz

2 配置perl模块

cd bin 
./list.modules
./test.modules

./circos -modules | grep "missing"
missing            Clone
missing            Config::General
missing            Font::TTF::Font
missing            GD
missing            GD::Polyline
missing            List::MoreUtils
missing            Math::Bezier
missing            Math::Round
missing            Math::VecStat
missing            Params::Validate
missing            Readonly
missing            Regexp::Common
missing            SVG
missing            Set::IntSpan
missing            Statistics::Basic
missing            Text::Format

#写一个cpan的脚本
./circos -modules | grep "missing" |awk '{print "cpan" $2}' >cpan.sh

2.安装所需要的模块

 perl -MCPAN -e shell
 >capn[1]:install Config::General
 >capn[2]:install ...
问题界面.png GD.png

这两个missing的文件需要进一步解决

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