Single Cell RNA-seq10X genomics

实验记录8:用R包clues评价聚类结果

2018-12-22  本文已影响44人  MC学公卫

梗概

①从不同的tSNE聚类结果中根据一个R包来评判哪个更优


https://cran.r-project.org/web/packages/clues/clues.pdf

Description We developed the clues R package to provide functions
for automatically estimating the number of clusters and
getting the final cluster partition without any input
parameter except the stopping rule for convergence.
The package also provides functions to
evaluate and compare the performances of partitions of a data
set both numerically and graphically.

输入的参数为收敛规则(?)

安装与加载

install.packages("clues")
library(clues)
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