代码库2-安装R包相关代码

2021-12-17 本文已影响0人江湾青年

使用withr的C99标准装包

library(withr)
with_makevars(c(PKG_CFLAGS = "-std=c11"),
BiocManager::install("scran"),
assignment = "+=")

指定安装某版本的R包

packageurl <- "https://cran.r-project.org/src/contrib/Archive/Seurat/Seurat_4.0.5.tar.gz"
install.packages(packageurl, repos=NULL, type="source")

remotes::install_version(package = 'SeuratObject', version = package_version('4.0.2'))

安装本地包

devtools::install_local('/local/txm/software/SnapATAC-master.zip')