如何解读系统进化树

2018-01-24  本文已影响0人  zhoujj2013

工具:
https://itol.embl.de/
http://www.onezoom.org/

参考资料:
http://www.sohu.com/a/200298644_761120
http://epidemic.bio.ed.ac.uk/how_to_read_a_phylogeny
https://www.khanacademy.org/science/biology/her/tree-of-life/a/phylogenetic-trees
https://www.nature.com/scitable/topicpage/reading-a-phylogenetic-tree-the-meaning-of-41956
https://evolution.berkeley.edu/evolibrary/article/evo_05
https://www.khanacademy.org/science/biology/her/tree-of-life/v/understanding-and-building-phylogenetic-trees-or-cladograms
http://biopython.org/wiki/Phylo
http://citeseerx.ist.psu.edu/viewdoc/download?doi=10.1.1.464.329&rep=rep1&type=pdf

Example papers:

  1. A novel olfactory receptor gene family in teleost fish
    http://genome.cshlp.org/content/17/10/1448.full.pdf+html
tree example1
  1. The evolution of duplicate gene expression in mammalian organs
    http://genome.cshlp.org/content/27/9/1461.full.pdf+html
tree example2

https://biodatamining.biomedcentral.com/articles/10.1186/1756-0381-3-1

http://molevol.cmima.csic.es/castresana/Gblocks.html

https://academic.oup.com/nar/article/36/suppl_2/W465/2505761

https://www.sciencedirect.com/science/article/pii/S0168952502027221?via%3Dihub
http://science.sciencemag.org/content/300/5617/321.full

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