bioconda 配置

2020-05-20 本文已影响0人惊穹

1，安装anaconda

2，新建环境

conda create -n bioinfo python=3

3, 配置环境

conda config --add channels conda-forge

conda config --add channels defaults

conda config --add channels r

conda config --add channels bioconda

conda config --add channels https://mirrors.tuna.tsinghua.edu.cn/anaconda/pkgs/free/

conda config --add channels https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/conda-forge/

conda config --add channels https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/msys2/

conda config --add channels https://mirrors.tuna.tsinghua.edu.cn/anaconda/cloud/bioconda/

conda config --add channels https://mirrors.ustc.edu.cn/anaconda/pkgs/free/

conda config --add channels https://mirrors.ustc.edu.cn/anaconda/cloud/bioconda/

conda config --set show_channel_urls yes

4，安装软件

source activate bioinfo

curl http://data.biostarhandbook.com/install/conda.txt|xargs conda install-y