##20220423

ESCC_marker

plasma：

IGHG3、IGHG1、MZB1

JCHAIN

B：

CD79A、MS4A1、IGHM、CD19、CD79A、CD79B、MS4A1

T:

CD2、CD3D、CD3E、CD3G

Myeloid：

LYZ、CD68、MS4A6A、

EPCAM:

EPCAM、KRT17、KRT5、KRT19、KRT18、KRT15

Fibroblast：

DCN、COL1A2、COL1A1、COL3A1、ACTA2

NKT:

CCL5、NKG7、KLRD1、KLRF1、KLRB1、FGFBP2

Endothelial：

CLDN5、RAMP2、VWF、CDH5、PECAM1、ENG

###

Epithelial/Tumor: EPCAM, Keratin genes (KRT7, KRT8, KRT17), SPRR3; 

T cells: CD3E, CD3D, TRBC1/2, TRAC; 

Myeloid cells: LYZ, CD86, CD68, FCGR3A;

B cells and plasma cells: CD79A/B, JCHAIN, IGKC, IGHG3; 

Endothelial cells: CLDN5, FLT1, CDH1, RAMP2;

Fibroblasts: DCN, C1R, COL1A1, ACTA2; 

Smooth muscle cells: TAGLN, CNN1; 

Mast cells: TPSAB1

##20220421

immune_cellmarker <- c("CD3D",'CD3E','CD2',"CD4","CD8A",#T cell

                      'CD79A','MZB1','MS4A1','CD79B',#B cell

                      'FOXP3',"IL32",'TNFRSF18','TNFRSF4',#Treg

                      'IL17A','IL17F','CD40LG',#Th17

                      'S100A8','CXCL8','SOD2','NAMPT',#Neutrophil

                      'SEPP1','C1QA','APOE','CD14','RNASE1',#Macrophage

                      'TPSAB1','TPSB2','CPA3','HPGDS',#Mast

                      'HLA-DRA','HLA-DPB1','CST3','HLA-DPA1',#mDC

                      'PTGDS','SOX4','GZMB','IRF7',#pDC

                      'IGHA1','IGHG1',"IGHG2",#Plasma

                      'KLRF1','KLRD1','XCL2','XCL1'#NK

                      )